PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0387s00360.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 111aa    MW: 12262 Da    PI: 10.1757
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0387s00360.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-201767155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++y+GVr ++ +gr++AeIrdp +   ++r++lg+f++ eeAa+a++aa++ l+g
  Vang0387s00360.1 17 PRYRGVRKRP-WGRFAAEIRDPLK---KARVWLGTFDFVEEAAQAYDAAARTLRG 67
                      68********.**********743...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.9E-151767IPR001471AP2/ERF domain
CDDcd000184.11E-201777No hitNo description
SMARTSM003801.2E-321881IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-221877IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-311876IPR001471AP2/ERF domain
PROSITE profilePS5103222.9451875IPR001471AP2/ERF domain
PRINTSPR003677.4E-101930IPR001471AP2/ERF domain
PRINTSPR003677.4E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MEAAAAAAAN KSLLKEPRYR GVRKRPWGRF AAEIRDPLKK ARVWLGTFDF VEEAAQAYDA  60
AARTLRGPKA KTNFPLSHPF YIVSSSFRPP LPFDLNAPPF DDAAADDDLR *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-211576264ATERF1
3gcc_A4e-211576264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513889.11e-37PREDICTED: ethylene-responsive transcription factor 7-like
SwissprotQ9LDE41e-32ERF83_ARATH; Ethylene-responsive transcription factor 7
TrEMBLA0A0S3RWN31e-73A0A0S3RWN3_PHAAN; Uncharacterized protein
STRINGGLYMA18G10290.13e-36(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22633484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.19e-28ethylene response factor 7